Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
KRT2P35908 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
KRT2P35908 CICP4-201ENST00000447359 2812 ntBASIC16.29■□□□□ 0.2
KRT2P35908 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT2P35908 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.29■□□□□ 0.2
KRT2P35908 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
KRT2P35908 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.29■□□□□ 0.2
KRT2P35908 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
KRT2P35908 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT2P35908 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
KRT2P35908 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 FRMPD2B-201ENST00000431305 1347 ntBASIC16.28■□□□□ 0.2
KRT2P35908 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT2P35908 GPAA1P2-201ENST00000417923 928 ntBASIC16.28■□□□□ 0.2
KRT2P35908 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT2P35908 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 BX284668.4-201ENST00000453917 508 ntBASIC16.28■□□□□ 0.2
KRT2P35908 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.28■□□□□ 0.2
KRT2P35908 CHCHD2P2-201ENST00000503744 321 ntBASIC16.28■□□□□ 0.2
KRT2P35908 SCARNA20.5-201ENST00000516991 142 ntBASIC16.28■□□□□ 0.2
KRT2P35908 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT2P35908 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
KRT2P35908 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT2P35908 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 AC091544.8-201ENST00000619490 361 ntBASIC16.28■□□□□ 0.2
KRT2P35908 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.28■□□□□ 0.2
KRT2P35908 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KRT2P35908 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT2P35908 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
KRT2P35908 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
KRT2P35908 AC138028.6-201ENST00000616106 1482 ntBASIC16.28■□□□□ 0.2
KRT2P35908 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
KRT2P35908 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
KRT2P35908 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.27■□□□□ 0.2
KRT2P35908 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.27■□□□□ 0.2
KRT2P35908 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
KRT2P35908 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
KRT2P35908 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
KRT2P35908 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
KRT2P35908 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
KRT2P35908 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 OR8T1P-201ENST00000421347 918 ntBASIC16.27■□□□□ 0.2
KRT2P35908 AL008707.1-201ENST00000422498 534 ntBASIC16.27■□□□□ 0.2
KRT2P35908 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT2P35908 AC099548.2-209ENST00000480264 625 ntBASIC16.27■□□□□ 0.2
KRT2P35908 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
KRT2P35908 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.27■□□□□ 0.2
KRT2P35908 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
KRT2P35908 CR392039.2-201ENST00000623182 509 ntBASIC16.27■□□□□ 0.2
KRT2P35908 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT2P35908 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT2P35908 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.27■□□□□ 0.19
KRT2P35908 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
KRT2P35908 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
KRT2P35908 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT2P35908 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.26■□□□□ 0.19
KRT2P35908 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT2P35908 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
KRT2P35908 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
KRT2P35908 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms