Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFC1P35251 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFC1P35251 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
RFC1P35251 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
RFC1P35251 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.04■□□□□ -0
RFC1P35251 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 DMBT1P1-203ENST00000636837 4628 ntBASIC15.03■□□□□ -0
RFC1P35251 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.03■□□□□ -0
RFC1P35251 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 AC078875.1-201ENST00000431907 724 ntBASIC15.03■□□□□ -0
RFC1P35251 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.03■□□□□ -0
RFC1P35251 AC104306.2-201ENST00000451877 341 ntBASIC15.03■□□□□ -0
RFC1P35251 SERPINA13P-202ENST00000478994 924 ntBASIC15.03■□□□□ -0
RFC1P35251 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.03■□□□□ -0
RFC1P35251 AC126915.1-201ENST00000522847 1038 ntBASIC15.03■□□□□ -0
RFC1P35251 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.03■□□□□ -0
RFC1P35251 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RFC1P35251 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.03■□□□□ -0
RFC1P35251 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.03■□□□□ -0
RFC1P35251 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.03■□□□□ -0
RFC1P35251 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RFC1P35251 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFC1P35251 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.02■□□□□ -0
RFC1P35251 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RFC1P35251 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
RFC1P35251 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.02■□□□□ -0
RFC1P35251 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.02■□□□□ -0
RFC1P35251 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFC1P35251 BRWD1P1-201ENST00000401091 371 ntBASIC15.02■□□□□ -0
RFC1P35251 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.02■□□□□ -0
RFC1P35251 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.02■□□□□ -0
RFC1P35251 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.02■□□□□ -0
RFC1P35251 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 AC009779.1-201ENST00000551138 283 ntBASIC15.02■□□□□ -0
RFC1P35251 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.02■□□□□ -0
RFC1P35251 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.02■□□□□ -0
RFC1P35251 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.02■□□□□ -0
RFC1P35251 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.02■□□□□ -0
RFC1P35251 MIR6752-201ENST00000618442 71 ntBASIC15.02■□□□□ -0
RFC1P35251 AL008638.5-201ENST00000623814 1298 ntBASIC15.02■□□□□ -0
RFC1P35251 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.02■□□□□ -0
RFC1P35251 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RFC1P35251 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.02□□□□□ -0.01
RFC1P35251 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.02□□□□□ -0.01
RFC1P35251 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RFC1P35251 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms