Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL121994.1-201ENST00000413189 402 ntBASIC23.89■■□□□ 1.42
TOP2AP11388 RFNG-202ENST00000429557 994 ntTSL 5 BASIC23.89■■□□□ 1.42
TOP2AP11388 GYG1-209ENST00000483267 801 ntTSL 2 BASIC23.89■■□□□ 1.42
TOP2AP11388 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC23.89■■□□□ 1.42
TOP2AP11388 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC23.89■■□□□ 1.42
TOP2AP11388 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TOP2AP11388 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC23.89■■□□□ 1.42
TOP2AP11388 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC23.89■■□□□ 1.42
TOP2AP11388 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TOP2AP11388 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
TOP2AP11388 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC23.89■■□□□ 1.42
TOP2AP11388 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TOP2AP11388 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC23.89■■□□□ 1.42
TOP2AP11388 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TOP2AP11388 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
TOP2AP11388 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
TOP2AP11388 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 AP001331.1-201ENST00000413008 1015 ntBASIC23.89■■□□□ 1.41
TOP2AP11388 FAM197Y6-201ENST00000420524 766 ntBASIC23.89■■□□□ 1.41
TOP2AP11388 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC23.89■■□□□ 1.41
TOP2AP11388 AC026412.1-206ENST00000502273 206 ntBASIC23.89■■□□□ 1.41
TOP2AP11388 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 ISL1-203ENST00000511384 981 ntTSL 5 BASIC23.89■■□□□ 1.41
TOP2AP11388 AP001102.1-201ENST00000528959 409 ntBASIC23.89■■□□□ 1.41
TOP2AP11388 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC23.89■■□□□ 1.41
TOP2AP11388 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
TOP2AP11388 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC23.89■■□□□ 1.41
TOP2AP11388 EMP3-204ENST00000596315 761 ntTSL 2 BASIC23.89■■□□□ 1.41
TOP2AP11388 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC23.89■■□□□ 1.41
TOP2AP11388 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TOP2AP11388 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 HLF-202ENST00000430986 1385 ntTSL 2 BASIC23.89■■□□□ 1.41
TOP2AP11388 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TOP2AP11388 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 AL928654.5-201ENST00000624831 2501 ntBASIC23.88■■□□□ 1.41
TOP2AP11388 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TOP2AP11388 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC23.88■■□□□ 1.41
TOP2AP11388 RPE-208ENST00000436630 1128 ntTSL 2 BASIC23.88■■□□□ 1.41
TOP2AP11388 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC23.88■■□□□ 1.41
TOP2AP11388 CXXC1P1-202ENST00000489409 1212 ntBASIC23.88■■□□□ 1.41
TOP2AP11388 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TOP2AP11388 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC23.88■■□□□ 1.41
TOP2AP11388 GBAP1-208ENST00000566701 1546 ntBASIC23.88■■□□□ 1.41
TOP2AP11388 AC211476.2-201ENST00000608799 708 ntBASIC23.88■■□□□ 1.41
TOP2AP11388 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC23.88■■□□□ 1.41
TOP2AP11388 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TOP2AP11388 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TOP2AP11388 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 MKRN7P-201ENST00000433469 1371 ntBASIC23.87■■□□□ 1.41
TOP2AP11388 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
TOP2AP11388 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 RNA5SP84-201ENST00000364740 107 ntBASIC23.87■■□□□ 1.41
TOP2AP11388 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC23.87■■□□□ 1.41
TOP2AP11388 RPSAP16-201ENST00000447583 821 ntBASIC23.87■■□□□ 1.41
TOP2AP11388 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC23.87■■□□□ 1.41
TOP2AP11388 AC087072.1-201ENST00000603727 421 ntBASIC23.87■■□□□ 1.41
TOP2AP11388 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TOP2AP11388 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC23.87■■□□□ 1.41
TOP2AP11388 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TOP2AP11388 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TOP2AP11388 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TOP2AP11388 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TOP2AP11388 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TOP2AP11388 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC23.86■■□□□ 1.41
TOP2AP11388 MIR339-201ENST00000362153 94 ntBASIC23.86■■□□□ 1.41
TOP2AP11388 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TOP2AP11388 FTH1P18-201ENST00000412071 549 ntBASIC23.86■■□□□ 1.41
TOP2AP11388 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC23.86■■□□□ 1.41
TOP2AP11388 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC23.86■■□□□ 1.41
TOP2AP11388 OR4C14P-201ENST00000440929 923 ntBASIC23.86■■□□□ 1.41
TOP2AP11388 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms