Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TRGV3P03979 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV3P03979 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV3P03979 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.27□□□□□ -0.61
TRGV3P03979 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV3P03979 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV3P03979 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.27□□□□□ -0.61
TRGV3P03979 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
TRGV3P03979 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRGV3P03979 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 TCAM1P-207ENST00000485295 1537 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 KRT18P36-201ENST00000411618 1276 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.26□□□□□ -0.61
TRGV3P03979 XBP1P1-201ENST00000436573 652 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 AC099548.2-209ENST00000480264 625 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 RCC2P8-201ENST00000502779 1035 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.26□□□□□ -0.61
TRGV3P03979 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.26□□□□□ -0.61
TRGV3P03979 AC022217.1-201ENST00000521069 738 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.26□□□□□ -0.61
TRGV3P03979 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 AC003686.1-201ENST00000550956 1034 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 AC009779.1-201ENST00000551138 283 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.26□□□□□ -0.61
TRGV3P03979 SNORD3B-2-202ENST00000571722 791 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 AC090386.2-201ENST00000623010 1039 ntBASIC11.26□□□□□ -0.61
TRGV3P03979 DDX5-235ENST00000630471 473 ntTSL 4 BASIC11.26□□□□□ -0.61
TRGV3P03979 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
TRGV3P03979 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TRGV3P03979 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.26□□□□□ -0.61
TRGV3P03979 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRGV3P03979 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.26□□□□□ -0.61
TRGV3P03979 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
TRGV3P03979 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TRGV3P03979 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRGV3P03979 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms