Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 AC020658.7-201ENST00000624274 2442 ntBASIC10.82□□□□□ -0.68
HLA-DRB4X5D2U9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC016397.2-201ENST00000624848 1985 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AL354877.1-201ENST00000424412 413 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AL161932.2-201ENST00000435436 679 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AL157407.1-201ENST00000435784 904 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MTX1P1-201ENST00000440904 838 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC012441.2-201ENST00000444843 739 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MFF-223ENST00000524634 647 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 RBM8B-201ENST00000555532 525 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC009884.2-201ENST00000603110 324 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 OS9-206ENST00000435406 2346 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC012617.1-204ENST00000586340 2305 ntBASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
HLA-DRB4X5D2U9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms