| CNTNAP2 | Q9UHC6 | AL512330.1-201 | ENST00000456701 | 349 nt | TSL 3 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TIMP1-205 | ENST00000456754 | 1095 nt | TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC105254.1-201 | ENST00000507782 | 621 nt | TSL 4 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CMTM1-209 | ENST00000528324 | 749 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | UBXN1-214 | ENST00000533000 | 367 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CMTM1-217 | ENST00000533666 | 493 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | PMFBP1-208 | ENST00000537792 | 955 nt | APPRIS ALT2 TSL 2 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CRADD-205 | ENST00000548483 | 1056 nt | TSL 2 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | RPGRIP1-210 | ENST00000556336 | 2955 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | MT3-203 | ENST00000565838 | 421 nt | TSL 3 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | LINC02176-201 | ENST00000569104 | 598 nt | TSL 4 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC005696.1-201 | ENST00000572876 | 443 nt | TSL 2 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AIPL1-211 | ENST00000576776 | 1190 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC242426.4-201 | ENST00000606856 | 573 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | BAP1-211 | ENST00000615113 | 489 nt | BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SNRPA1-216 | ENST00000626000 | 539 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TEX264-201 | ENST00000341333 | 1340 nt | APPRIS P3 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | UBE2V2-205 | ENST00000521346 | 1322 nt | TSL 3 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CEP170B-204 | ENST00000556508 | 6683 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | RCSD1-202 | ENST00000367854 | 3135 nt | APPRIS P3 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AL157996.1-201 | ENST00000624684 | 2299 nt | BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ZNF333-209 | ENST00000601134 | 1392 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SLC2A13-201 | ENST00000280871 | 7003 nt | APPRIS P1 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ATF4-202 | ENST00000396680 | 1419 nt | APPRIS P1 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | DUT-208 | ENST00000559540 | 1441 nt | TSL 2 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | COQ7-209 | ENST00000569127 | 2575 nt | TSL 2 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | PUF60-209 | ENST00000527197 | 1559 nt | TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | PAX8-AS1-204 | ENST00000436293 | 2687 nt | TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TAGLN2-202 | ENST00000368096 | 1603 nt | TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TRIM67-201 | ENST00000366653 | 3936 nt | APPRIS P2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | LRRK1-201 | ENST00000388948 | 7671 nt | APPRIS P1 TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ZNF84-202 | ENST00000392319 | 7020 nt | APPRIS P2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CDC42SE2-202 | ENST00000395246 | 3485 nt | APPRIS P1 TSL 5 BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TDP2-201 | ENST00000341060 | 2120 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC099548.2-204 | ENST00000481651 | 2106 nt | TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | MRPS10-201 | ENST00000053468 | 2110 nt | APPRIS P1 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | MCL1-202 | ENST00000369026 | 3932 nt | APPRIS P1 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ZNF800-201 | ENST00000265827 | 4203 nt | APPRIS P1 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | NUCB1-201 | ENST00000405315 | 2668 nt | APPRIS P2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | NFATC4-226 | ENST00000556279 | 2924 nt | APPRIS ALT2 TSL 1 (best) BASIC | 15.47 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | IL23A-201 | ENST00000228534 | 1046 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TCL1B-201 | ENST00000340722 | 1166 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | LINC00265-2P-201 | ENST00000413372 | 782 nt | BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AL109767.1-201 | ENST00000429450 | 564 nt | TSL 4 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | PSMB8-AS1-204 | ENST00000429600 | 996 nt | TSL 2 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AL139241.1-201 | ENST00000433374 | 1168 nt | TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AL365295.1-203 | ENST00000435322 | 566 nt | TSL 4 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | PARP8-206 | ENST00000503665 | 572 nt | TSL 4 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC092535.3-201 | ENST00000504969 | 468 nt | TSL 3 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | RTN4RL2-203 | ENST00000533205 | 637 nt | TSL 3 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | FAM60A-207 | ENST00000542983 | 738 nt | TSL 4 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | IGHV3OR16-12-201 | ENST00000570121 | 353 nt | APPRIS P1 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | MIR4649-201 | ENST00000582839 | 64 nt | BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC010422.5-201 | ENST00000597961 | 585 nt | APPRIS P1 TSL 4 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | DUSP22-213 | ENST00000605035 | 1231 nt | TSL 2 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | WT1-AS_6.1-201 | ENST00000614919 | 121 nt | BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TP53-221 | ENST00000615910 | 1149 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC025262.2-201 | ENST00000623975 | 1056 nt | BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ATP2B3-204 | ENST00000370186 | 6742 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CAB39L-204 | ENST00000409130 | 1411 nt | TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SLC25A19-205 | ENST00000442286 | 1496 nt | APPRIS P1 TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | COX4I1-208 | ENST00000564903 | 1481 nt | TSL 2 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | MARVELD2-203 | ENST00000436532 | 1563 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | KRT8P24-201 | ENST00000560290 | 1559 nt | BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TAGLN2-203 | ENST00000368097 | 1604 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SNX19-213 | ENST00000534726 | 1656 nt | TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | NT5C3A-213 | ENST00000610140 | 1670 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | CSAD-203 | ENST00000379846 | 1962 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | AC011462.1-202 | ENST00000540732 | 1960 nt | APPRIS P1 TSL 2 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SH3D21-205 | ENST00000505871 | 2205 nt | TSL 2 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | ECE1-201 | ENST00000264205 | 2381 nt | APPRIS P4 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | TBL3-208 | ENST00000615855 | 2472 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SPOCK3-201 | ENST00000357154 | 2986 nt | APPRIS ALT2 TSL 5 BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | LRRN1-201 | ENST00000319331 | 3823 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | FECH-201 | ENST00000262093 | 3853 nt | APPRIS P3 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.07 | | |
| CNTNAP2 | Q9UHC6 | SAPCD2-201 | ENST00000409687 | 3848 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | FOXF1-201 | ENST00000262426 | 3516 nt | APPRIS P1 TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | RNF222-202 | ENST00000399398 | 3062 nt | APPRIS P1 TSL 5 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | HYOU1-219 | ENST00000614711 | 3057 nt | TSL 5 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC104452.1-203 | ENST00000636166 | 2266 nt | APPRIS P1 TSL 5 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | CRACR2A-201 | ENST00000252322 | 2186 nt | TSL 1 (best) BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | CCDC169-SOHLH2-201 | ENST00000511166 | 2051 nt | APPRIS P1 TSL 2 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | RTFDC1-201 | ENST00000023939 | 1745 nt | TSL 2 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC010255.3-203 | ENST00000509403 | 1727 nt | APPRIS P1 TSL 2 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | OR2A25-202 | ENST00000641441 | 1733 nt | APPRIS P1 BASIC | 15.46 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | CHRNA1-204 | ENST00000409323 | 1585 nt | TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC006372.4-201 | ENST00000624122 | 1543 nt | BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | KCTD1-207 | ENST00000580059 | 1425 nt | APPRIS P1 TSL 3 BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | SERHL-201 | ENST00000359906 | 1346 nt | TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | TMPRSS3-202 | ENST00000398397 | 1342 nt | TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | CGB1-201 | ENST00000301407 | 573 nt | APPRIS P1 TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AURKB-201 | ENST00000316199 | 1254 nt | APPRIS ALT1 TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | PSMB10-201 | ENST00000358514 | 1218 nt | APPRIS P1 TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | TOMM20L-201 | ENST00000360945 | 620 nt | APPRIS P1 TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | Z69890.1-201 | ENST00000382990 | 339 nt | BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC007952.2-201 | ENST00000399091 | 1176 nt | TSL 1 (best) BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AL137058.1-201 | ENST00000418237 | 673 nt | TSL 5 BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC004869.1-201 | ENST00000440935 | 540 nt | TSL 4 BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | ERP29P1-201 | ENST00000442902 | 706 nt | BASIC | 15.45 | ■□□□□ 0.06 | | |
| CNTNAP2 | Q9UHC6 | AC084030.1-201 | ENST00000455068 | 561 nt | TSL 4 BASIC | 15.45 | ■□□□□ 0.06 | | |