Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL009178.2-201ENST00000597278 2719 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 NOC2LP1-201ENST00000450578 752 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 AC130709.1-201ENST00000484779 1212 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 RN7SL665P-201ENST00000578793 300 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 MIR4522-201ENST00000584932 87 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 CICP16-201ENST00000502609 2813 ntBASIC15.28■□□□□ 0.04
BEST2Q8NFU1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST2Q8NFU1 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 HSPA7-201ENST00000445535 1927 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 AP000356.3-201ENST00000382243 753 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 CHCHD2P9-201ENST00000461726 456 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 MIR3147-201ENST00000577811 66 ntBASIC15.27■□□□□ 0.04
BEST2Q8NFU1 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST2Q8NFU1 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
BEST2Q8NFU1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AC023908.3-201ENST00000564211 3047 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AC074138.1-201ENST00000611182 1303 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms