Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AC005730.2-201ENST00000564549 1184 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AL096828.3-201ENST00000615354 462 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 TUBB1P2-201ENST00000422712 1306 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 TUBB1P1-201ENST00000503144 1300 ntBASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TTC9CQ8N5M4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FAM90A7P-201ENST00000382628 1395 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FAM90A23P-201ENST00000400136 1395 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC092053.3-201ENST00000641308 4975 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GK-202ENST00000378941 458 ntTSL 3 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 VDAC1P1-201ENST00000439229 848 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AL591846.1-201ENST00000451736 433 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FAM8A2P-201ENST00000528813 1142 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 RN7SL163P-201ENST00000583100 276 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC007663.3-201ENST00000609632 465 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AL136295.7-201ENST00000619226 1200 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 AC004899.1-201ENST00000424687 1714 ntBASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TTC9CQ8N5M4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TTC9CQ8N5M4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms