Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 TCAM1P-207ENST00000485295 1537 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 LINC01230-201ENST00000625222 3017 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 FP325330.2-201ENST00000624219 5630 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 AC007952.5-201ENST00000572818 1486 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PHBP15-201ENST00000574228 665 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 AL109837.1-201ENST00000603272 613 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 MIR6769A-201ENST00000617340 73 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 AC016397.2-201ENST00000624848 1985 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 HSPA7-201ENST00000445535 1927 ntBASIC13.68□□□□□ -0.22
RNF44Q7L0R7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF44Q7L0R7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 AC005089.1-201ENST00000619486 2241 ntBASIC13.67□□□□□ -0.22
RNF44Q7L0R7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 BRD7P5-201ENST00000299197 1822 ntBASIC13.67□□□□□ -0.22
RNF44Q7L0R7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 LINC01815-202ENST00000641468 1409 ntBASIC13.67□□□□□ -0.22
RNF44Q7L0R7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.67□□□□□ -0.22
RNF44Q7L0R7 KRT18P15-201ENST00000458108 1291 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms