Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ABCC6P1-203ENST00000565566 1170 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 EMP3-204ENST00000596315 761 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 SNX20-205ENST00000610485 557 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC006986.1-201ENST00000612764 241 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AL157996.1-201ENST00000624684 2299 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 FTH1P18-201ENST00000412071 549 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 MED15P3-201ENST00000413613 326 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 TPT1P6-201ENST00000458298 514 ntBASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 B9D1-206ENST00000461069 923 ntTSL 2 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDC42BPAQ5VT25 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 YBX1P3-201ENST00000468366 909 ntBASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 AL137028.2-201ENST00000614601 256 ntBASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42BPAQ5VT25 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 LINC02486-201ENST00000604157 3000 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AHCYP3-201ENST00000420053 1279 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 URB1-AS1-201ENST00000534991 831 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AC138627.1-201ENST00000641127 1257 ntBASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42BPAQ5VT25 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms