Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.96□□□□□ -0.01
IRX4P78413 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
IRX4P78413 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.96□□□□□ -0.01
IRX4P78413 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.96□□□□□ -0.01
IRX4P78413 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 AC104784.1-201ENST00000473096 294 ntBASIC14.96□□□□□ -0.01
IRX4P78413 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.96□□□□□ -0.01
IRX4P78413 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.96□□□□□ -0.01
IRX4P78413 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
IRX4P78413 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.96□□□□□ -0.01
IRX4P78413 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.96□□□□□ -0.01
IRX4P78413 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.96□□□□□ -0.01
IRX4P78413 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.96□□□□□ -0.01
IRX4P78413 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
IRX4P78413 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.96□□□□□ -0.01
IRX4P78413 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IRX4P78413 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.02
IRX4P78413 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IRX4P78413 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IRX4P78413 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IRX4P78413 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
IRX4P78413 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IRX4P78413 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
IRX4P78413 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IRX4P78413 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.95□□□□□ -0.02
IRX4P78413 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 MEX3B-202ENST00000558133 4333 ntBASIC14.95□□□□□ -0.02
IRX4P78413 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IRX4P78413 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.95□□□□□ -0.02
IRX4P78413 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.95□□□□□ -0.02
IRX4P78413 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.95□□□□□ -0.02
IRX4P78413 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.95□□□□□ -0.02
IRX4P78413 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.95□□□□□ -0.02
IRX4P78413 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.95□□□□□ -0.02
IRX4P78413 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IRX4P78413 AC004899.1-201ENST00000424687 1714 ntBASIC14.95□□□□□ -0.02
IRX4P78413 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.94□□□□□ -0.02
IRX4P78413 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms