Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 BAK1P2-201ENST00000532665 631 ntBASIC16.04■□□□□ 0.16
CCNA1P78396 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 AL049840.2-201ENST00000602722 535 ntBASIC16.04■□□□□ 0.16
CCNA1P78396 AL031673.1-201ENST00000611460 466 ntBASIC16.04■□□□□ 0.16
CCNA1P78396 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNA1P78396 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNA1P78396 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNA1P78396 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNA1P78396 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 CICP14-201ENST00000629111 2732 ntBASIC16.03■□□□□ 0.16
CCNA1P78396 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 AC104640.1-201ENST00000562617 2109 ntBASIC16.03■□□□□ 0.16
CCNA1P78396 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 DKKL1P1-201ENST00000400550 698 ntBASIC16.03■□□□□ 0.16
CCNA1P78396 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.03■□□□□ 0.16
CCNA1P78396 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 AC092862.1-201ENST00000541534 533 ntBASIC16.03■□□□□ 0.16
CCNA1P78396 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNA1P78396 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CCNA1P78396 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNA1P78396 DBET-201ENST00000630918 3363 ntBASIC16.03■□□□□ 0.16
CCNA1P78396 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CCNA1P78396 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 AL022313.4-201ENST00000562756 2046 ntBASIC16.02■□□□□ 0.16
CCNA1P78396 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNA1P78396 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNA1P78396 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNA1P78396 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNA1P78396 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CCNA1P78396 PTGER4P2-201ENST00000328411 252 ntBASIC16.02■□□□□ 0.16
CCNA1P78396 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNA1P78396 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms