Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CXCR4P61073 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.01□□□□□ -0.33
CXCR4P61073 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CXCR4P61073 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCR4P61073 DFFBP1-201ENST00000433250 979 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCR4P61073 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 AP001063.1-201ENST00000568332 529 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 CLUHP6-201ENST00000580789 941 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 AC009118.2-201ENST00000613275 655 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 AC002472.3-201ENST00000640124 621 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 CLUHP2-201ENST00000426660 1303 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CXCR4P61073 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 AC020917.4-201ENST00000623994 1999 ntBASIC13.01□□□□□ -0.33
CXCR4P61073 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCR4P61073 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCR4P61073 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCR4P61073 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13□□□□□ -0.33
CXCR4P61073 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13□□□□□ -0.33
CXCR4P61073 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13□□□□□ -0.33
CXCR4P61073 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13□□□□□ -0.33
CXCR4P61073 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 RCC2P1-201ENST00000452257 1476 ntBASIC13□□□□□ -0.33
CXCR4P61073 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13□□□□□ -0.33
CXCR4P61073 AL391825.1-201ENST00000457671 1364 ntBASIC13□□□□□ -0.33
CXCR4P61073 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13□□□□□ -0.33
CXCR4P61073 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13□□□□□ -0.33
CXCR4P61073 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13□□□□□ -0.33
CXCR4P61073 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13□□□□□ -0.33
CXCR4P61073 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13□□□□□ -0.33
CXCR4P61073 ABBA01031660.1-201ENST00000635219 756 ntBASIC13□□□□□ -0.33
CXCR4P61073 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CXCR4P61073 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13□□□□□ -0.33
CXCR4P61073 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms