Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AL512599.1-201ENST00000430724 685 ntBASIC11.93□□□□□ -0.5
RIPPLY3P57055 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC005962.1-201ENST00000584100 773 ntBASIC11.93□□□□□ -0.5
RIPPLY3P57055 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 AC005622.1-201ENST00000636801 1703 ntBASIC11.93□□□□□ -0.5
RIPPLY3P57055 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CICP8-201ENST00000455800 2813 ntBASIC11.93□□□□□ -0.5
RIPPLY3P57055 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
RIPPLY3P57055 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RIPPLY3P57055 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.93□□□□□ -0.5
RIPPLY3P57055 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CLUHP2-201ENST00000426660 1303 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AP000354.1-201ENST00000396982 456 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC108734.2-201ENST00000420887 1069 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 NRADDP-201ENST00000437305 691 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 SNRPD2P2-201ENST00000473818 333 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 RN7SL838P-201ENST00000481676 295 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC008494.1-201ENST00000497612 796 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RIPPLY3P57055 OR5BD1P-201ENST00000532527 817 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 RN7SL300P-201ENST00000582522 318 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC133540.1-201ENST00000620845 1019 ntBASIC11.92□□□□□ -0.5
RIPPLY3P57055 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC11.92□□□□□ -0.5
RIPPLY3P57055 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms