Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.39□□□□□ -0.11
WNT3AP56704 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3AP56704 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3AP56704 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 RCC2P1-201ENST00000452257 1476 ntBASIC14.38□□□□□ -0.11
WNT3AP56704 RPL13AP3-202ENST00000494676 1473 ntBASIC14.38□□□□□ -0.11
WNT3AP56704 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.38□□□□□ -0.11
WNT3AP56704 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
WNT3AP56704 RNA5SP359-201ENST00000364838 113 ntBASIC14.38□□□□□ -0.11
WNT3AP56704 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
WNT3AP56704 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.38□□□□□ -0.11
WNT3AP56704 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
WNT3AP56704 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 AL365181.3-201ENST00000605886 3222 ntBASIC14.38□□□□□ -0.11
WNT3AP56704 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.38□□□□□ -0.11
WNT3AP56704 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
WNT3AP56704 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3AP56704 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 AC131212.3-201ENST00000624087 4219 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.37□□□□□ -0.11
WNT3AP56704 RPS9P1-201ENST00000419943 583 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 AC007274.1-201ENST00000439805 662 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.37□□□□□ -0.11
WNT3AP56704 GOLGA2P8-201ENST00000505201 779 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 ZNF767P-206ENST00000513792 565 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.37□□□□□ -0.11
WNT3AP56704 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 KRT18P8-201ENST00000581937 1246 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 NAP1L6-202ENST00000641404 1222 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 AC015909.5-201ENST00000624336 2266 ntBASIC14.37□□□□□ -0.11
WNT3AP56704 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
WNT3AP56704 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
WNT3AP56704 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms