Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH4P55283 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH4P55283 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 AC026316.1-201ENST00000398900 414 ntBASIC14.5□□□□□ -0.09
CDH4P55283 LINC00265-2P-201ENST00000413372 782 ntBASIC14.5□□□□□ -0.09
CDH4P55283 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH4P55283 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 NDUFS6P1-201ENST00000485187 316 ntBASIC14.5□□□□□ -0.09
CDH4P55283 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH4P55283 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 PRKXP1-201ENST00000561423 1122 ntBASIC14.5□□□□□ -0.09
CDH4P55283 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH4P55283 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH4P55283 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 AC084346.2-201ENST00000607097 949 ntBASIC14.5□□□□□ -0.09
CDH4P55283 AC103691.2-201ENST00000618824 433 ntBASIC14.5□□□□□ -0.09
CDH4P55283 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH4P55283 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH4P55283 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH4P55283 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH4P55283 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH4P55283 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH4P55283 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH4P55283 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 AC079328.1-201ENST00000560358 952 ntBASIC14.49□□□□□ -0.09
CDH4P55283 SIGLEC22P-201ENST00000599104 714 ntBASIC14.49□□□□□ -0.09
CDH4P55283 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH4P55283 AC005632.3-201ENST00000605544 308 ntBASIC14.49□□□□□ -0.09
CDH4P55283 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 AC004554.1-201ENST00000422830 1468 ntBASIC14.49□□□□□ -0.09
CDH4P55283 AC061965.1-201ENST00000560524 1465 ntBASIC14.49□□□□□ -0.09
CDH4P55283 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH4P55283 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 AC117489.1-201ENST00000625169 3217 ntBASIC14.49□□□□□ -0.09
CDH4P55283 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH4P55283 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH4P55283 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms