Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.53□□□□□ -0.72
CKS2P33552 GPS2P2-201ENST00000430745 888 ntBASIC10.53□□□□□ -0.72
CKS2P33552 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.53□□□□□ -0.72
CKS2P33552 CEND1P1-201ENST00000451006 455 ntBASIC10.53□□□□□ -0.72
CKS2P33552 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.53□□□□□ -0.72
CKS2P33552 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
CKS2P33552 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.53□□□□□ -0.72
CKS2P33552 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC10.53□□□□□ -0.72
CKS2P33552 AC026271.4-201ENST00000578214 1833 ntBASIC10.53□□□□□ -0.72
CKS2P33552 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 IL9RP2-201ENST00000423948 1312 ntBASIC10.53□□□□□ -0.72
CKS2P33552 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.53□□□□□ -0.72
CKS2P33552 AC115284.2-201ENST00000624646 2054 ntBASIC10.53□□□□□ -0.72
CKS2P33552 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CKS2P33552 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 GHET1-201ENST00000627071 1906 ntBASIC10.52□□□□□ -0.72
CKS2P33552 AC106818.1-201ENST00000623223 3242 ntBASIC10.52□□□□□ -0.72
CKS2P33552 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.52□□□□□ -0.72
CKS2P33552 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
CKS2P33552 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
CKS2P33552 AC007614.5-201ENST00000623424 8892 ntBASIC10.52□□□□□ -0.72
CKS2P33552 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.52□□□□□ -0.72
CKS2P33552 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CKS2P33552 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CKS2P33552 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.52□□□□□ -0.73
CKS2P33552 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.52□□□□□ -0.73
CKS2P33552 HLA-V-204ENST00000476601 1289 ntBASIC10.52□□□□□ -0.73
CKS2P33552 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 GIMAP3P-201ENST00000495150 836 ntBASIC10.52□□□□□ -0.73
CKS2P33552 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.52□□□□□ -0.73
CKS2P33552 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.52□□□□□ -0.73
CKS2P33552 AC005586.2-201ENST00000563946 837 ntBASIC10.52□□□□□ -0.73
CKS2P33552 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 AC138761.1-201ENST00000584393 385 ntBASIC10.52□□□□□ -0.73
CKS2P33552 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms