Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 AC019294.4-201ENST00000561777 2905 ntBASIC12.23□□□□□ -0.45
CHATP28329 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
CHATP28329 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 FAM8A4P-201ENST00000435433 1213 ntBASIC12.23□□□□□ -0.45
CHATP28329 AL355864.2-201ENST00000447420 863 ntBASIC12.23□□□□□ -0.45
CHATP28329 RN7SL692P-201ENST00000464677 288 ntBASIC12.23□□□□□ -0.45
CHATP28329 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 RNA5SP486-201ENST00000515961 83 ntBASIC12.23□□□□□ -0.45
CHATP28329 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 AP001889.1-201ENST00000525414 633 ntBASIC12.23□□□□□ -0.45
CHATP28329 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 AL596325.1-201ENST00000563991 1082 ntBASIC12.23□□□□□ -0.45
CHATP28329 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 KRT18P8-201ENST00000581937 1246 ntBASIC12.23□□□□□ -0.45
CHATP28329 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 AC008825.2-201ENST00000603374 718 ntBASIC12.23□□□□□ -0.45
CHATP28329 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.23□□□□□ -0.45
CHATP28329 AC027601.3-201ENST00000622907 509 ntBASIC12.23□□□□□ -0.45
CHATP28329 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 AC068760.1-201ENST00000493579 1953 ntBASIC12.23□□□□□ -0.45
CHATP28329 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.23□□□□□ -0.45
CHATP28329 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.23□□□□□ -0.45
CHATP28329 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CHATP28329 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.22□□□□□ -0.45
CHATP28329 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CHATP28329 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CHATP28329 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
CHATP28329 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.22□□□□□ -0.45
CHATP28329 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
CHATP28329 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CHATP28329 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.22□□□□□ -0.45
CHATP28329 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.22□□□□□ -0.45
CHATP28329 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CHATP28329 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CHATP28329 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.22□□□□□ -0.45
CHATP28329 CD8B2-202ENST00000417670 633 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms