Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CDH3P22223 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.09□□□□□ -0.15
CDH3P22223 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 KRT8P28-201ENST00000433288 1390 ntBASIC14.09□□□□□ -0.15
CDH3P22223 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDH3P22223 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.08□□□□□ -0.15
CDH3P22223 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDH3P22223 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH3P22223 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.08□□□□□ -0.15
CDH3P22223 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH3P22223 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDH3P22223 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDH3P22223 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 AC144522.1-201ENST00000625111 1658 ntBASIC14.08□□□□□ -0.16
CDH3P22223 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 AL118506.1-201ENST00000601296 3082 ntBASIC14.08□□□□□ -0.16
CDH3P22223 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.08□□□□□ -0.16
CDH3P22223 CYP46A4P-201ENST00000414953 267 ntBASIC14.08□□□□□ -0.16
CDH3P22223 Z97180.1-201ENST00000445173 988 ntBASIC14.08□□□□□ -0.16
CDH3P22223 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 SPTLC1P5-201ENST00000450718 252 ntBASIC14.08□□□□□ -0.16
CDH3P22223 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 IGHJ2P-201ENST00000454480 60 ntBASIC14.08□□□□□ -0.16
CDH3P22223 AC125604.1-201ENST00000496255 707 ntBASIC14.08□□□□□ -0.16
CDH3P22223 RCC2P8-201ENST00000502779 1035 ntBASIC14.08□□□□□ -0.16
CDH3P22223 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.08□□□□□ -0.16
CDH3P22223 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.08□□□□□ -0.16
CDH3P22223 SNORD3B-2-202ENST00000571722 791 ntBASIC14.08□□□□□ -0.16
CDH3P22223 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.08□□□□□ -0.16
CDH3P22223 AL645939.5-201ENST00000606834 243 ntBASIC14.08□□□□□ -0.16
CDH3P22223 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 AC133540.1-201ENST00000620845 1019 ntBASIC14.08□□□□□ -0.16
CDH3P22223 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 TUBBP5-203ENST00000508529 1334 ntBASIC14.08□□□□□ -0.16
CDH3P22223 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.08□□□□□ -0.16
CDH3P22223 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.08□□□□□ -0.16
CDH3P22223 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CDH3P22223 AC019294.4-201ENST00000561777 2905 ntBASIC14.08□□□□□ -0.16
CDH3P22223 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDH3P22223 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 MTHFR-210ENST00000641407 2387 ntBASIC14.07□□□□□ -0.16
CDH3P22223 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.07□□□□□ -0.16
CDH3P22223 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH3P22223 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CDH3P22223 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CDH3P22223 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.07□□□□□ -0.16
CDH3P22223 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 AC006122.1-201ENST00000493323 440 ntBASIC14.07□□□□□ -0.16
CDH3P22223 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms