Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 GPR182-203ENST00000622922 591 ntBASIC14.65□□□□□ -0.06
ERCC2P18074 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC2P18074 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC2P18074 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC2P18074 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC2P18074 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ERCC2P18074 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
ERCC2P18074 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ERCC2P18074 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
ERCC2P18074 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ERCC2P18074 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.64□□□□□ -0.07
ERCC2P18074 AL008707.1-201ENST00000422498 534 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 AK2P2-201ENST00000439142 405 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 DUX4L50-201ENST00000455245 715 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 HIST2H2BC-201ENST00000498492 580 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 GOLGA2P8-201ENST00000505201 779 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC2P18074 RN7SL774P-201ENST00000577467 290 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 MIR4525-201ENST00000580000 75 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ERCC2P18074 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.64□□□□□ -0.07
ERCC2P18074 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ERCC2P18074 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 FAM90A12P-201ENST00000519497 2375 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 FAM90A24P-201ENST00000520792 2369 ntBASIC14.64□□□□□ -0.07
ERCC2P18074 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ERCC2P18074 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.64□□□□□ -0.07
ERCC2P18074 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
ERCC2P18074 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ERCC2P18074 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 RCC2P1-201ENST00000452257 1476 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC104581.4-201ENST00000623126 3052 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 AC015909.3-201ENST00000572855 1794 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 AL365181.3-201ENST00000605886 3222 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERCC2P18074 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
ERCC2P18074 ACTG1P2-201ENST00000415776 1125 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms