Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DOBP13765 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DOBP13765 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PEG13-201ENST00000631594 5667 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC078875.1-201ENST00000431907 724 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 NKAIN1P1-201ENST00000435754 582 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC044849.1-201ENST00000519737 1188 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 AL008638.5-201ENST00000623814 1298 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 LINC00115-201ENST00000473798 1317 ntBASIC12.79□□□□□ -0.36
HLA-DOBP13765 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DOBP13765 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DOBP13765 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC007952.5-201ENST00000572818 1486 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms