Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 MKL1-204ENST00000402630 747 ntTSL 2 BASIC23.34■■□□□ 1.33
CFTRP13569 RN7SL69P-201ENST00000468423 272 ntBASIC23.34■■□□□ 1.33
CFTRP13569 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 RN7SL638P-201ENST00000494527 290 ntBASIC23.34■■□□□ 1.33
CFTRP13569 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CFTRP13569 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC23.34■■□□□ 1.33
CFTRP13569 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CFTRP13569 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC23.34■■□□□ 1.33
CFTRP13569 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFTRP13569 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFTRP13569 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CFTRP13569 KRT8P24-201ENST00000560290 1559 ntBASIC23.34■■□□□ 1.33
CFTRP13569 AC011239.2-201ENST00000624820 1489 ntBASIC23.34■■□□□ 1.33
CFTRP13569 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC23.33■■□□□ 1.33
CFTRP13569 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC23.33■■□□□ 1.33
CFTRP13569 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CFTRP13569 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CFTRP13569 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 AL356653.1-201ENST00000402743 360 ntBASIC23.33■■□□□ 1.33
CFTRP13569 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC23.33■■□□□ 1.33
CFTRP13569 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 AACSP1-202ENST00000521412 1095 ntBASIC23.33■■□□□ 1.33
CFTRP13569 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC23.33■■□□□ 1.33
CFTRP13569 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CFTRP13569 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC23.33■■□□□ 1.33
CFTRP13569 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CFTRP13569 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CFTRP13569 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFTRP13569 CROT-203ENST00000419147 2959 ntTSL 2 BASIC23.33■■□□□ 1.32
CFTRP13569 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFTRP13569 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CFTRP13569 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC23.33■■□□□ 1.32
CFTRP13569 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CFTRP13569 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC23.33■■□□□ 1.32
CFTRP13569 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 NME1-209ENST00000511355 1645 ntTSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC23.32■■□□□ 1.32
CFTRP13569 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC23.32■■□□□ 1.32
CFTRP13569 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC23.32■■□□□ 1.32
CFTRP13569 FTH1-205ENST00000529631 507 ntTSL 4 BASIC23.32■■□□□ 1.32
CFTRP13569 HAX1-211ENST00000532105 771 ntTSL 3 BASIC23.32■■□□□ 1.32
CFTRP13569 AC091691.1-201ENST00000583587 1018 ntBASIC23.32■■□□□ 1.32
CFTRP13569 MIR5193-201ENST00000584510 109 ntBASIC23.32■■□□□ 1.32
CFTRP13569 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC23.32■■□□□ 1.32
CFTRP13569 AC244097.1-201ENST00000621631 1216 ntBASIC23.32■■□□□ 1.32
CFTRP13569 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 AC099795.2-201ENST00000639582 440 ntBASIC23.32■■□□□ 1.32
CFTRP13569 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC23.32■■□□□ 1.32
CFTRP13569 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC23.32■■□□□ 1.32
CFTRP13569 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CFTRP13569 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CFTRP13569 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 BCL2-203ENST00000589955 5011 ntBASIC23.32■■□□□ 1.32
CFTRP13569 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CFTRP13569 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CFTRP13569 TUBB8P9-201ENST00000422534 1276 ntBASIC23.31■■□□□ 1.32
CFTRP13569 TUBB8P10-201ENST00000430210 1279 ntBASIC23.31■■□□□ 1.32
CFTRP13569 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC23.31■■□□□ 1.32
CFTRP13569 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC23.31■■□□□ 1.32
CFTRP13569 NEMF-210ENST00000556672 590 ntTSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 AL136298.3-201ENST00000556746 445 ntBASIC23.31■■□□□ 1.32
CFTRP13569 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC23.31■■□□□ 1.32
CFTRP13569 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC23.31■■□□□ 1.32
CFTRP13569 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CFTRP13569 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms