Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HTR1AP08908 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HTR1AP08908 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 SALL4P6-201ENST00000429385 1691 ntBASIC13.03□□□□□ -0.32
HTR1AP08908 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 KLF2P2-201ENST00000416807 1039 ntBASIC13.03□□□□□ -0.32
HTR1AP08908 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.03□□□□□ -0.32
HTR1AP08908 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.03□□□□□ -0.32
HTR1AP08908 AC027237.1-201ENST00000560942 655 ntBASIC13.03□□□□□ -0.32
HTR1AP08908 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.03□□□□□ -0.32
HTR1AP08908 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.03□□□□□ -0.32
HTR1AP08908 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 KRT8P28-201ENST00000433288 1390 ntBASIC13.03□□□□□ -0.32
HTR1AP08908 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HTR1AP08908 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR1AP08908 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.03□□□□□ -0.32
HTR1AP08908 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
HTR1AP08908 AC008620.2-201ENST00000510294 1569 ntBASIC13.03□□□□□ -0.32
HTR1AP08908 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR1AP08908 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR1AP08908 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HTR1AP08908 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR1AP08908 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR1AP08908 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR1AP08908 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.02□□□□□ -0.32
HTR1AP08908 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR1AP08908 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR1AP08908 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR1AP08908 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR1AP08908 DDX12P-201ENST00000432996 2947 ntBASIC13.02□□□□□ -0.33
HTR1AP08908 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HTR1AP08908 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HTR1AP08908 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR1AP08908 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR1AP08908 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR1AP08908 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR1AP08908 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR1AP08908 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR1AP08908 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR1AP08908 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms