Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CHGBP05060 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHGBP05060 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17■□□□□ 0.31
CHGBP05060 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CHGBP05060 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17■□□□□ 0.31
CHGBP05060 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17■□□□□ 0.31
CHGBP05060 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CHGBP05060 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHGBP05060 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.99■□□□□ 0.31
CHGBP05060 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.99■□□□□ 0.31
CHGBP05060 CHCHD2P2-201ENST00000503744 321 ntBASIC16.99■□□□□ 0.31
CHGBP05060 AC019193.1-201ENST00000506678 823 ntBASIC16.99■□□□□ 0.31
CHGBP05060 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 MIR6842-201ENST00000612539 65 ntBASIC16.99■□□□□ 0.31
CHGBP05060 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.99■□□□□ 0.31
CHGBP05060 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHGBP05060 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.99■□□□□ 0.31
CHGBP05060 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHGBP05060 RCC2P1-201ENST00000452257 1476 ntBASIC16.99■□□□□ 0.31
CHGBP05060 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 AC063926.3-201ENST00000624734 5658 ntBASIC16.98■□□□□ 0.31
CHGBP05060 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.98■□□□□ 0.31
CHGBP05060 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 AGAP12P-201ENST00000585227 2359 ntBASIC16.98■□□□□ 0.31
CHGBP05060 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 BX679664.3-201ENST00000414070 555 ntBASIC16.98■□□□□ 0.31
CHGBP05060 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.98■□□□□ 0.31
CHGBP05060 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 AC113935.1-201ENST00000471722 555 ntBASIC16.98■□□□□ 0.31
CHGBP05060 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.98■□□□□ 0.31
CHGBP05060 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CHGBP05060 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.98■□□□□ 0.31
CHGBP05060 AC005041.3-201ENST00000606287 649 ntBASIC16.98■□□□□ 0.31
CHGBP05060 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
CHGBP05060 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHGBP05060 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.98■□□□□ 0.31
CHGBP05060 AC008620.2-201ENST00000510294 1569 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms