Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 HMGA1P1-201ENST00000415560 1062 ntBASIC12□□□□□ -0.49
CD74P04233 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 CICP12-201ENST00000455801 843 ntBASIC12□□□□□ -0.49
CD74P04233 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 ENPP7P5-201ENST00000541031 1031 ntBASIC12□□□□□ -0.49
CD74P04233 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 AL512310.5-201ENST00000551999 515 ntBASIC12□□□□□ -0.49
CD74P04233 RN7SL48P-201ENST00000579283 293 ntBASIC12□□□□□ -0.49
CD74P04233 CLUHP6-201ENST00000580789 941 ntBASIC12□□□□□ -0.49
CD74P04233 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12□□□□□ -0.49
CD74P04233 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12□□□□□ -0.49
CD74P04233 RNA5-8SN1-201ENST00000610460 153 ntBASIC12□□□□□ -0.49
CD74P04233 RNA5-8SN5-202ENST00000612463 153 ntBASIC12□□□□□ -0.49
CD74P04233 RNA5-8SN4-201ENST00000613359 153 ntBASIC12□□□□□ -0.49
CD74P04233 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 RNA5-8SN5-201ENST00000619471 153 ntBASIC12□□□□□ -0.49
CD74P04233 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 AC007952.5-201ENST00000572818 1486 ntBASIC12□□□□□ -0.49
CD74P04233 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CD74P04233 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CD74P04233 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 AL021155.1-201ENST00000438808 2637 ntBASIC11.99□□□□□ -0.49
CD74P04233 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 TRIM80P-201ENST00000455685 2848 ntBASIC11.99□□□□□ -0.49
CD74P04233 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 SPDYE19P-201ENST00000338590 713 ntBASIC11.99□□□□□ -0.49
CD74P04233 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 AC004890.2-204ENST00000481968 304 ntBASIC11.99□□□□□ -0.49
CD74P04233 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.99□□□□□ -0.49
CD74P04233 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.99□□□□□ -0.49
CD74P04233 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.99□□□□□ -0.49
CD74P04233 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 LAP3P2-201ENST00000454686 1454 ntBASIC11.99□□□□□ -0.49
CD74P04233 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CD74P04233 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CD74P04233 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CD74P04233 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms