Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 AC131902.2-201ENST00000566892 2172 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
KRT6AP02538 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.88□□□□□ -0.19
KRT6AP02538 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.88□□□□□ -0.19
KRT6AP02538 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 AC026954.1-201ENST00000429771 1293 ntBASIC13.88□□□□□ -0.19
KRT6AP02538 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.88□□□□□ -0.19
KRT6AP02538 CTBP2P5-201ENST00000454986 1264 ntBASIC13.88□□□□□ -0.19
KRT6AP02538 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.88□□□□□ -0.19
KRT6AP02538 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.88□□□□□ -0.19
KRT6AP02538 AC124068.2-201ENST00000569473 1109 ntBASIC13.88□□□□□ -0.19
KRT6AP02538 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.88□□□□□ -0.19
KRT6AP02538 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 AC105233.6-201ENST00000642093 218 ntBASIC13.88□□□□□ -0.19
KRT6AP02538 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.88□□□□□ -0.19
KRT6AP02538 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
KRT6AP02538 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
KRT6AP02538 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.87□□□□□ -0.19
KRT6AP02538 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
KRT6AP02538 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
KRT6AP02538 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.87□□□□□ -0.19
KRT6AP02538 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.87□□□□□ -0.19
KRT6AP02538 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.87□□□□□ -0.19
KRT6AP02538 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.87□□□□□ -0.19
KRT6AP02538 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.87□□□□□ -0.19
KRT6AP02538 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
KRT6AP02538 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.87□□□□□ -0.19
KRT6AP02538 KRT18P15-201ENST00000458108 1291 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms