Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 ANKRD19P-201ENST00000338192 862 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.36□□□□□ -0.11
PFDN6O15212 HILS1-202ENST00000545329 423 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 SNX29P1-201ENST00000548357 1007 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.36□□□□□ -0.11
PFDN6O15212 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.36□□□□□ -0.11
PFDN6O15212 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 Z98259.2-201ENST00000641583 609 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 MBLAC2-202ENST00000514906 1936 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 AL590824.1-201ENST00000403828 1349 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 AC144522.1-201ENST00000625111 1658 ntBASIC14.36□□□□□ -0.11
PFDN6O15212 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PFDN6O15212 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PFDN6O15212 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.36□□□□□ -0.11
PFDN6O15212 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 KRT8P29-201ENST00000420409 1371 ntBASIC14.35□□□□□ -0.11
PFDN6O15212 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
PFDN6O15212 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 BTBD6P1-201ENST00000412176 1267 ntBASIC14.35□□□□□ -0.11
PFDN6O15212 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.35□□□□□ -0.11
PFDN6O15212 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 IGHV3-71-201ENST00000523324 359 ntBASIC14.35□□□□□ -0.11
PFDN6O15212 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.35□□□□□ -0.11
PFDN6O15212 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
PFDN6O15212 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 KRT18P8-201ENST00000581937 1246 ntBASIC14.35□□□□□ -0.11
PFDN6O15212 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.35□□□□□ -0.11
PFDN6O15212 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.35□□□□□ -0.11
PFDN6O15212 AP000346.4-201ENST00000614827 381 ntBASIC14.35□□□□□ -0.11
PFDN6O15212 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PFDN6O15212 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PFDN6O15212 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
PFDN6O15212 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.34□□□□□ -0.11
PFDN6O15212 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN6O15212 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PFDN6O15212 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms