Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 RPL7P35-201ENST00000446943 740 ntBASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AP002803.1-201ENST00000528836 498 ntBASIC14.09□□□□□ -0.15
SATB2Q9UPW6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 YRDCP1-201ENST00000621419 643 ntBASIC14.09□□□□□ -0.15
SATB2Q9UPW6 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 FRMPD2B-201ENST00000431305 1347 ntBASIC14.09□□□□□ -0.15
SATB2Q9UPW6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 DGCR9-201ENST00000609630 2415 ntBASIC14.09□□□□□ -0.15
SATB2Q9UPW6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SATB2Q9UPW6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SATB2Q9UPW6 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SATB2Q9UPW6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.08□□□□□ -0.15
SATB2Q9UPW6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SATB2Q9UPW6 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SATB2Q9UPW6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 BEND3P1-201ENST00000421591 1944 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 CES1P1-201ENST00000421606 1704 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AC026320.2-201ENST00000434379 478 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AL031713.1-201ENST00000564813 661 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 MIR6769A-201ENST00000617340 73 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AC242376.2-201ENST00000619355 883 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AC027601.3-201ENST00000622907 509 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AC009084.3-201ENST00000623356 437 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 LINC00552-201ENST00000625151 2579 ntBASIC14.08□□□□□ -0.16
SATB2Q9UPW6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.08□□□□□ -0.16
SATB2Q9UPW6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SATB2Q9UPW6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.07□□□□□ -0.16
SATB2Q9UPW6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SATB2Q9UPW6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms