Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FMO6P-201ENST00000236166 1620 ntBASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AC013553.1-201ENST00000560906 267 ntBASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 MIR6746-201ENST00000620971 63 ntBASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SYNPO2Q9UMS6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 PCDHA3-202ENST00000532566 4594 ntBASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SYNPO2Q9UMS6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SYNPO2Q9UMS6 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 AL672207.1-201ENST00000328462 1570 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 KRT8P24-201ENST00000560290 1559 ntBASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYNPO2Q9UMS6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms