Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 SNORA50C-201ENST00000408535 133 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AP000347.1-202ENST00000435868 847 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AC040169.1-201ENST00000565382 521 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 SNORA50.1-201ENST00000628590 135 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 CICP2-201ENST00000420675 2328 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 LINC02228-202ENST00000641261 2489 ntBASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX1-2Q9UD57 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 AC009533.1-201ENST00000539757 3158 ntBASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX1-2Q9UD57 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 ARSEP1-201ENST00000420443 635 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 NUS1P3-201ENST00000423502 862 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 KRT18P3-201ENST00000451602 1288 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 HLA-J-203ENST00000494367 1087 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AC026410.3-201ENST00000514280 936 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AL512361.1-201ENST00000554200 418 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AC061965.1-201ENST00000560524 1465 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 AC009108.4-201ENST00000623284 2451 ntBASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX1-2Q9UD57 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms