Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 MKRN5P-201ENST00000445263 1467 ntBASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RSPO3Q9BXY4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RSPO3Q9BXY4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC078875.1-201ENST00000431907 724 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC011742.3-201ENST00000439053 820 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 RNA5SP412-201ENST00000516234 123 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC009779.1-201ENST00000551138 283 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AL583810.1-201ENST00000553344 1045 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AL157813.1-201ENST00000612996 587 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 AC005695.3-201ENST00000614522 232 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 MIR6752-201ENST00000618442 71 ntBASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.02□□□□□ -0.33
RSPO3Q9BXY4 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 OR8T1P-201ENST00000421347 918 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 KRT223P-202ENST00000449164 1292 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AC090164.2-201ENST00000611487 516 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AL161773.1-201ENST00000624845 863 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AC004923.1-202ENST00000642106 209 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AL590824.1-201ENST00000403828 1349 ntBASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RSPO3Q9BXY4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms