Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 AC069061.4-201ENST00000581294 1347 ntBASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 HNRNPA1P68-201ENST00000425806 979 ntBASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 DIS3L2P1-201ENST00000509197 559 ntBASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 PSME3-213ENST00000592169 826 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF40Q8TER5 CICP6-201ENST00000457191 2729 ntBASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 SNORA30.1-201ENST00000363193 129 ntBASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 SOD1-202ENST00000389995 865 ntTSL 3 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 NAA10-205ENST00000393712 908 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 RN7SL452P-201ENST00000482923 291 ntBASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 RCC2P1-201ENST00000452257 1476 ntBASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AC012358.2-201ENST00000430010 1434 ntBASIC20.21■□□□□ 0.83
ARHGEF40Q8TER5 AP000437.1-201ENST00000624057 2085 ntBASIC20.2■□□□□ 0.83
ARHGEF40Q8TER5 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 CD9-212ENST00000610354 1315 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 IL6RP1-201ENST00000417848 1273 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 AC010997.1-201ENST00000447646 350 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 HNRNPA1P4-201ENST00000509706 756 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 FAM213AP2-201ENST00000521579 683 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 MIR4539-201ENST00000579784 60 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 CYP4F10P-201ENST00000589560 752 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 AC116036.2-201ENST00000607592 462 ntBASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF40Q8TER5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF40Q8TER5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF40Q8TER5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF40Q8TER5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms