Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 OR5BD1P-201ENST00000532527 817 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC055811.3-201ENST00000584952 686 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 WASH3P-207ENST00000560956 1394 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC073869.2-201ENST00000417338 1026 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 OR8T1P-201ENST00000421347 918 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AL160191.2-201ENST00000603975 601 ntBASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RP1L1Q8IWN7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 AC093909.3-201ENST00000504783 336 ntBASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 TRMT112P3-201ENST00000580149 358 ntBASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.97□□□□□ -0.33
RP1L1Q8IWN7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms