Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC116345.2-201ENST00000512837 523 ntBASIC13.7□□□□□ -0.22
RNF44Q7L0R7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CHMP4BP1-201ENST00000556017 588 ntBASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AL021578.1-201ENST00000613646 709 ntBASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AL353770.1-201ENST00000614915 403 ntBASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 AC015909.3-201ENST00000572855 1794 ntBASIC13.7□□□□□ -0.22
RNF44Q7L0R7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF44Q7L0R7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ELK2AP-201ENST00000392510 1007 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 RPS9P1-201ENST00000419943 583 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC007274.2-201ENST00000421675 662 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 DUX4L50-201ENST00000455245 715 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 RN7SL258P-201ENST00000478664 300 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC245884.6-201ENST00000515672 1067 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AL512310.5-201ENST00000551999 515 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC242376.1-201ENST00000559033 726 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AC097724.1-201ENST00000609581 426 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 AF254983.2-201ENST00000612331 135 ntBASIC13.69□□□□□ -0.22
RNF44Q7L0R7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF44Q7L0R7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms