Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 RNA5SP359-201ENST00000364838 113 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 HMGA1P1-201ENST00000415560 1062 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.76□□□□□ -0.37
H3F3AP84243 TMEM198B-204ENST00000484016 896 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 RN7SL530P-201ENST00000485097 298 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.76□□□□□ -0.37
H3F3AP84243 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 AC103810.3-201ENST00000583567 96 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.76□□□□□ -0.37
H3F3AP84243 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
H3F3AP84243 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 LINC00115-201ENST00000473798 1317 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 BRD7P5-201ENST00000299197 1822 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.76□□□□□ -0.37
H3F3AP84243 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.76□□□□□ -0.37
H3F3AP84243 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
H3F3AP84243 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3F3AP84243 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.75□□□□□ -0.37
H3F3AP84243 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 AC041040.2-201ENST00000622926 2899 ntBASIC12.75□□□□□ -0.37
H3F3AP84243 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H3F3AP84243 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
H3F3AP84243 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.75□□□□□ -0.37
H3F3AP84243 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.75□□□□□ -0.37
H3F3AP84243 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.75□□□□□ -0.37
H3F3AP84243 SPTLC1P5-201ENST00000450718 252 ntBASIC12.75□□□□□ -0.37
H3F3AP84243 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.75□□□□□ -0.37
H3F3AP84243 AC116345.2-201ENST00000512837 523 ntBASIC12.75□□□□□ -0.37
H3F3AP84243 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.75□□□□□ -0.37
H3F3AP84243 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
H3F3AP84243 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
H3F3AP84243 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.75□□□□□ -0.37
H3F3AP84243 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3F3AP84243 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms