Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RAE1P78406 FMO6P-201ENST00000236166 1620 ntBASIC13.49□□□□□ -0.25
RAE1P78406 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 AL139158.3-201ENST00000641212 1562 ntBASIC13.49□□□□□ -0.25
RAE1P78406 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.48□□□□□ -0.25
RAE1P78406 AC025183.3-201ENST00000623526 1482 ntBASIC13.48□□□□□ -0.25
RAE1P78406 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.48□□□□□ -0.25
RAE1P78406 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 TSPY25P-201ENST00000429463 745 ntBASIC13.48□□□□□ -0.25
RAE1P78406 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.48□□□□□ -0.25
RAE1P78406 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.48□□□□□ -0.25
RAE1P78406 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
RAE1P78406 AC044849.1-201ENST00000519737 1188 ntBASIC13.48□□□□□ -0.25
RAE1P78406 AC126915.1-201ENST00000522847 1038 ntBASIC13.48□□□□□ -0.25
RAE1P78406 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AC013355.1-201ENST00000562625 723 ntBASIC13.48□□□□□ -0.25
RAE1P78406 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.48□□□□□ -0.25
RAE1P78406 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AL022334.2-201ENST00000610000 484 ntBASIC13.48□□□□□ -0.25
RAE1P78406 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.48□□□□□ -0.25
RAE1P78406 AL136295.7-201ENST00000619226 1200 ntBASIC13.48□□□□□ -0.25
RAE1P78406 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.48□□□□□ -0.25
RAE1P78406 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.48□□□□□ -0.25
RAE1P78406 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AC008620.2-201ENST00000510294 1569 ntBASIC13.48□□□□□ -0.25
RAE1P78406 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.48□□□□□ -0.25
RAE1P78406 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.48□□□□□ -0.25
RAE1P78406 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAE1P78406 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 AC009474.1-201ENST00000455096 1565 ntBASIC13.47□□□□□ -0.25
RAE1P78406 AC004241.5-201ENST00000623870 2448 ntBASIC13.47□□□□□ -0.25
RAE1P78406 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RAE1P78406 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.47□□□□□ -0.25
RAE1P78406 RPS9P1-201ENST00000419943 583 ntBASIC13.47□□□□□ -0.25
RAE1P78406 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.47□□□□□ -0.25
RAE1P78406 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.47□□□□□ -0.25
RAE1P78406 AC106794.1-201ENST00000506935 792 ntBASIC13.47□□□□□ -0.25
RAE1P78406 MARK2P5-201ENST00000507649 634 ntBASIC13.47□□□□□ -0.25
RAE1P78406 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.47□□□□□ -0.25
RAE1P78406 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms