Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.59□□□□□ -0.23
SKP1P63208 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.59□□□□□ -0.23
SKP1P63208 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
SKP1P63208 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
SKP1P63208 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SKP1P63208 AC007191.1-201ENST00000623179 2995 ntBASIC13.59□□□□□ -0.23
SKP1P63208 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SKP1P63208 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SKP1P63208 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
SKP1P63208 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SKP1P63208 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
SKP1P63208 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.58□□□□□ -0.23
SKP1P63208 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.58□□□□□ -0.23
SKP1P63208 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SKP1P63208 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.58□□□□□ -0.24
SKP1P63208 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SKP1P63208 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 RNA5SP359-201ENST00000364838 113 ntBASIC13.58□□□□□ -0.24
SKP1P63208 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 HMGA1P1-201ENST00000415560 1062 ntBASIC13.58□□□□□ -0.24
SKP1P63208 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.58□□□□□ -0.24
SKP1P63208 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.58□□□□□ -0.24
SKP1P63208 AC005077.2-201ENST00000449786 690 ntBASIC13.58□□□□□ -0.24
SKP1P63208 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SKP1P63208 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.58□□□□□ -0.24
SKP1P63208 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.58□□□□□ -0.24
SKP1P63208 CU633904.3-201ENST00000624042 1029 ntBASIC13.58□□□□□ -0.24
SKP1P63208 AC007952.5-201ENST00000572818 1486 ntBASIC13.58□□□□□ -0.24
SKP1P63208 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.58□□□□□ -0.24
SKP1P63208 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.58□□□□□ -0.24
SKP1P63208 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SKP1P63208 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.58□□□□□ -0.24
SKP1P63208 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.58□□□□□ -0.24
SKP1P63208 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SKP1P63208 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
SKP1P63208 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.57□□□□□ -0.24
SKP1P63208 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 AL662890.1-201ENST00000396818 632 ntBASIC13.57□□□□□ -0.24
SKP1P63208 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.57□□□□□ -0.24
SKP1P63208 CYP46A4P-201ENST00000414953 267 ntBASIC13.57□□□□□ -0.24
SKP1P63208 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SKP1P63208 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 ISCA2P1-201ENST00000425548 448 ntBASIC13.57□□□□□ -0.24
SKP1P63208 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.57□□□□□ -0.24
SKP1P63208 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.57□□□□□ -0.24
SKP1P63208 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.57□□□□□ -0.24
SKP1P63208 SPTLC1P5-201ENST00000450718 252 ntBASIC13.57□□□□□ -0.24
SKP1P63208 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.57□□□□□ -0.24
SKP1P63208 DUX4L50-201ENST00000455245 715 ntBASIC13.57□□□□□ -0.24
SKP1P63208 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 HIST2H2BC-201ENST00000498492 580 ntBASIC13.57□□□□□ -0.24
SKP1P63208 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.57□□□□□ -0.24
SKP1P63208 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.57□□□□□ -0.24
SKP1P63208 KRT8P1-201ENST00000557533 1207 ntBASIC13.57□□□□□ -0.24
SKP1P63208 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.57□□□□□ -0.24
SKP1P63208 AC093752.3-201ENST00000567343 901 ntBASIC13.57□□□□□ -0.24
SKP1P63208 AL022334.2-201ENST00000610000 484 ntBASIC13.57□□□□□ -0.24
SKP1P63208 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.57□□□□□ -0.24
SKP1P63208 AP001505.2-201ENST00000616815 443 ntBASIC13.57□□□□□ -0.24
SKP1P63208 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms