Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CKS1BP61024 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CKS1BP61024 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CKS1BP61024 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC10.12□□□□□ -0.79
CKS1BP61024 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
CKS1BP61024 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.12□□□□□ -0.79
CKS1BP61024 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CKS1BP61024 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.12□□□□□ -0.79
CKS1BP61024 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.12□□□□□ -0.79
CKS1BP61024 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC10.12□□□□□ -0.79
CKS1BP61024 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
CKS1BP61024 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CKS1BP61024 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 PCDHA6-201ENST00000378126 3267 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 AC004461.1-201ENST00000412461 403 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 TOMM22P5-201ENST00000416399 439 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 AC074338.1-201ENST00000416825 156 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 FDX1P1-201ENST00000449115 551 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 POLD2P1-201ENST00000511220 997 ntBASIC10.11□□□□□ -0.79
CKS1BP61024 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.11□□□□□ -0.79
CKS1BP61024 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CKS1BP61024 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
CKS1BP61024 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CKS1BP61024 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CKS1BP61024 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CKS1BP61024 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 AC020763.3-201ENST00000625095 2904 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 AL360270.3-201ENST00000609118 1348 ntBASIC10.1□□□□□ -0.79
CKS1BP61024 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CKS1BP61024 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC10.1□□□□□ -0.79
CKS1BP61024 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms