Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC006122.1-201ENST00000493323 440 ntBASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC019193.1-201ENST00000506678 823 ntBASIC16.41■□□□□ 0.22
CHMP4BP1P59074 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC092299.1-201ENST00000632679 757 ntBASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP4BP1P59074 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AL136172.1-201ENST00000598590 1394 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AL157407.1-201ENST00000435784 904 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AC253536.4-201ENST00000440539 267 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 NOC2LP1-201ENST00000450578 752 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 GCOM2-201ENST00000509133 1104 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 MIR4754-201ENST00000582477 89 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AL805961.1-201ENST00000642026 753 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 FRMPD2B-201ENST00000431305 1347 ntBASIC16.4■□□□□ 0.22
CHMP4BP1P59074 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP4BP1P59074 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP4BP1P59074 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP4BP1P59074 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP4BP1P59074 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHMP4BP1P59074 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 CYP4F23P-201ENST00000593402 1579 ntBASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP4BP1P59074 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms