Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TUBP50607 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.09■□□□□ 0.01
TUBP50607 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.09■□□□□ 0.01
TUBP50607 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TUBP50607 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TUBP50607 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.08■□□□□ 0.01
TUBP50607 AL365209.1-201ENST00000624418 6473 ntBASIC15.08■□□□□ 0.01
TUBP50607 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TUBP50607 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TUBP50607 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
TUBP50607 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.08■□□□□ 0
TUBP50607 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.08■□□□□ 0
TUBP50607 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.08■□□□□ 0
TUBP50607 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.08■□□□□ 0
TUBP50607 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 MIR3907-201ENST00000579424 151 ntBASIC15.08■□□□□ 0
TUBP50607 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.08■□□□□ 0
TUBP50607 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.08■□□□□ 0
TUBP50607 MIR6769A-201ENST00000617340 73 ntBASIC15.08■□□□□ 0
TUBP50607 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.08■□□□□ 0
TUBP50607 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.08■□□□□ 0
TUBP50607 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.08■□□□□ 0
TUBP50607 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.08■□□□□ 0
TUBP50607 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 AC007326.2-201ENST00000624224 7579 ntBASIC15.08■□□□□ 0
TUBP50607 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
TUBP50607 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.08■□□□□ 0
TUBP50607 LAP3P2-201ENST00000454686 1454 ntBASIC15.08■□□□□ 0
TUBP50607 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TUBP50607 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.07■□□□□ 0
TUBP50607 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TUBP50607 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 NUTM2HP-201ENST00000442076 2498 ntBASIC15.07■□□□□ 0
TUBP50607 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TUBP50607 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.07■□□□□ 0
TUBP50607 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TUBP50607 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 RN7SL832P-201ENST00000607781 1756 ntBASIC15.07■□□□□ 0
TUBP50607 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
TUBP50607 RNA5SP359-201ENST00000364838 113 ntBASIC15.07■□□□□ 0
TUBP50607 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.07■□□□□ 0
TUBP50607 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.07■□□□□ 0
TUBP50607 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.07■□□□□ 0
TUBP50607 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.07■□□□□ 0
TUBP50607 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.07■□□□□ 0
TUBP50607 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TUBP50607 AC140658.4-201ENST00000561990 352 ntBASIC15.07■□□□□ 0
TUBP50607 PHBP15-201ENST00000574228 665 ntBASIC15.07■□□□□ 0
TUBP50607 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
TUBP50607 AC012044.1-201ENST00000603431 297 ntBASIC15.07■□□□□ 0
TUBP50607 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.07■□□□□ 0
TUBP50607 AC104506.1-201ENST00000609247 429 ntBASIC15.07■□□□□ 0
TUBP50607 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.07■□□□□ 0
TUBP50607 LINC01783-202ENST00000614408 828 ntBASIC15.07■□□□□ 0
TUBP50607 BX284668.2-205ENST00000619677 828 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms