Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LINC01140-210ENST00000590653 3315 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
PCP4P48539 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 USF1-201ENST00000368019 998 ntTSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 AC091799.1-201ENST00000422823 811 ntBASIC9.16□□□□□ -0.94
PCP4P48539 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC9.16□□□□□ -0.94
PCP4P48539 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC9.16□□□□□ -0.94
PCP4P48539 AQP7-207ENST00000447660 998 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 AC002558.1-201ENST00000488906 803 ntBASIC9.16□□□□□ -0.94
PCP4P48539 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC9.16□□□□□ -0.94
PCP4P48539 ACTG1P22-201ENST00000603793 1099 ntBASIC9.16□□□□□ -0.94
PCP4P48539 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 CLP1-203ENST00000529430 1778 ntTSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 TRPS1-211ENST00000520276 4083 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 SEC14L2-202ENST00000405717 1733 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 BNC2-202ENST00000380667 3361 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 AC010997.6-201ENST00000623230 1645 ntBASIC9.16□□□□□ -0.94
PCP4P48539 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 CCDC14-201ENST00000310351 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 MRPL10-201ENST00000290208 2013 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 CDHR2-203ENST00000506348 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 AC138028.6-201ENST00000616106 1482 ntBASIC9.15□□□□□ -0.94
PCP4P48539 OR10N1P-202ENST00000641519 1479 ntBASIC9.15□□□□□ -0.94
PCP4P48539 ZNF550-205ENST00000457177 3376 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
PCP4P48539 GBAP1-201ENST00000368374 1873 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 REST-210ENST00000638187 1334 ntTSL 5 BASIC9.15□□□□□ -0.94
PCP4P48539 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 GPX1-201ENST00000419349 1106 ntBASIC9.15□□□□□ -0.94
PCP4P48539 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
PCP4P48539 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC9.15□□□□□ -0.94
PCP4P48539 BOD1-206ENST00000480951 814 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 AC023632.3-201ENST00000521633 145 ntBASIC9.15□□□□□ -0.94
PCP4P48539 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC9.15□□□□□ -0.94
PCP4P48539 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 AC034236.2-201ENST00000606662 1610 ntBASIC9.15□□□□□ -0.94
PCP4P48539 OR4D2-202ENST00000641866 2011 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
PCP4P48539 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 PRICKLE1-205ENST00000548696 3635 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
PCP4P48539 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
PCP4P48539 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
PCP4P48539 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
PCP4P48539 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.15□□□□□ -0.95
PCP4P48539 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
PCP4P48539 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PCP4P48539 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
PCP4P48539 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
PCP4P48539 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
PCP4P48539 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC9.15□□□□□ -0.95
PCP4P48539 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC9.15□□□□□ -0.95
PCP4P48539 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC9.15□□□□□ -0.95
PCP4P48539 AC122129.1-201ENST00000354746 1815 ntBASIC9.15□□□□□ -0.95
PCP4P48539 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms