Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SSR1P43307 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SSR1P43307 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.31■□□□□ 0.04
SSR1P43307 COX5BP8-201ENST00000416911 349 ntBASIC15.31■□□□□ 0.04
SSR1P43307 ARSEP1-201ENST00000420443 635 ntBASIC15.31■□□□□ 0.04
SSR1P43307 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR1P43307 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.31■□□□□ 0.04
SSR1P43307 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.31■□□□□ 0.04
SSR1P43307 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR1P43307 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR1P43307 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SSR1P43307 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AC027237.1-201ENST00000560942 655 ntBASIC15.31■□□□□ 0.04
SSR1P43307 PPY2P-201ENST00000582808 702 ntBASIC15.31■□□□□ 0.04
SSR1P43307 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.31■□□□□ 0.04
SSR1P43307 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 AHCYP2-201ENST00000430630 1300 ntBASIC15.31■□□□□ 0.04
SSR1P43307 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.31■□□□□ 0.04
SSR1P43307 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AC009093.10-201ENST00000641956 1442 ntBASIC15.31■□□□□ 0.04
SSR1P43307 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SSR1P43307 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 MIR497HG-202ENST00000572453 3838 ntBASIC15.31■□□□□ 0.04
SSR1P43307 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SSR1P43307 AC090114.2-201ENST00000608477 7054 ntBASIC15.31■□□□□ 0.04
SSR1P43307 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SSR1P43307 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.3■□□□□ 0.04
SSR1P43307 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SSR1P43307 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.3■□□□□ 0.04
SSR1P43307 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.3■□□□□ 0.04
SSR1P43307 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 CNN2P8-201ENST00000421872 913 ntBASIC15.3■□□□□ 0.04
SSR1P43307 NME2P1-201ENST00000426182 414 ntBASIC15.3■□□□□ 0.04
SSR1P43307 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.3■□□□□ 0.04
SSR1P43307 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 AL035414.1-201ENST00000451327 857 ntBASIC15.3■□□□□ 0.04
SSR1P43307 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 CROCCP4-201ENST00000457096 498 ntBASIC15.3■□□□□ 0.04
SSR1P43307 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.3■□□□□ 0.04
SSR1P43307 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.3■□□□□ 0.04
SSR1P43307 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SSR1P43307 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SSR1P43307 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.3■□□□□ 0.04
SSR1P43307 AC005586.2-201ENST00000563946 837 ntBASIC15.3■□□□□ 0.04
SSR1P43307 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms