Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 EIF5AP2-201ENST00000585668 1047 ntBASIC14.89□□□□□ -0.03
MTHFRP42898 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.89□□□□□ -0.03
MTHFRP42898 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MTHFRP42898 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.89□□□□□ -0.03
MTHFRP42898 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MTHFRP42898 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
MTHFRP42898 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.88□□□□□ -0.03
MTHFRP42898 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.88□□□□□ -0.03
MTHFRP42898 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
MTHFRP42898 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.88□□□□□ -0.03
MTHFRP42898 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.88□□□□□ -0.03
MTHFRP42898 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.88□□□□□ -0.03
MTHFRP42898 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.88□□□□□ -0.03
MTHFRP42898 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.88□□□□□ -0.03
MTHFRP42898 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.88□□□□□ -0.03
MTHFRP42898 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.88□□□□□ -0.03
MTHFRP42898 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
MTHFRP42898 AC005912.2-201ENST00000619492 2400 ntBASIC14.88□□□□□ -0.03
MTHFRP42898 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MTHFRP42898 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.88□□□□□ -0.03
MTHFRP42898 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MTHFRP42898 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MTHFRP42898 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
MTHFRP42898 AP000354.1-201ENST00000396982 456 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.87□□□□□ -0.03
MTHFRP42898 AC083801.1-201ENST00000491689 358 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC14.87□□□□□ -0.03
MTHFRP42898 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.87□□□□□ -0.03
MTHFRP42898 OR2A1-AS1-210ENST00000496968 531 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 ALG1L3P-201ENST00000503331 765 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 AC095040.1-201ENST00000513286 675 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 IGHV1-12-201ENST00000518307 205 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.87□□□□□ -0.03
MTHFRP42898 TREHP1-201ENST00000531328 465 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 TRMT112P3-201ENST00000580149 358 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 CYP4F36P-201ENST00000589193 186 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 AC008972.2-201ENST00000606587 494 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 AL139339.2-201ENST00000608063 657 ntBASIC14.87□□□□□ -0.03
MTHFRP42898 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MTHFRP42898 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MTHFRP42898 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.87□□□□□ -0.03
MTHFRP42898 CICP4-201ENST00000447359 2812 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms