Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 AL023775.1-201ENST00000454907 1746 ntBASIC12.72□□□□□ -0.37
RPS27P42677 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.72□□□□□ -0.37
RPS27P42677 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.72□□□□□ -0.37
RPS27P42677 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 RPL7P3-201ENST00000441388 714 ntBASIC12.72□□□□□ -0.37
RPS27P42677 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.72□□□□□ -0.37
RPS27P42677 CTBP2P5-201ENST00000454986 1264 ntBASIC12.72□□□□□ -0.37
RPS27P42677 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.72□□□□□ -0.37
RPS27P42677 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.72□□□□□ -0.37
RPS27P42677 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.72□□□□□ -0.37
RPS27P42677 MIR3197-201ENST00000582241 73 ntBASIC12.72□□□□□ -0.37
RPS27P42677 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 AC068760.1-201ENST00000493579 1953 ntBASIC12.72□□□□□ -0.37
RPS27P42677 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 REXO1L6P-201ENST00000603433 1515 ntBASIC12.72□□□□□ -0.37
RPS27P42677 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
RPS27P42677 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPS27P42677 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RPS27P42677 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.71□□□□□ -0.37
RPS27P42677 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
RPS27P42677 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RPS27P42677 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RPS27P42677 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RPS27P42677 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.71□□□□□ -0.37
RPS27P42677 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.71□□□□□ -0.37
RPS27P42677 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.71□□□□□ -0.37
RPS27P42677 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.71□□□□□ -0.37
RPS27P42677 AP000812.2-201ENST00000538934 718 ntBASIC12.71□□□□□ -0.37
RPS27P42677 RBM8B-201ENST00000555532 525 ntBASIC12.71□□□□□ -0.37
RPS27P42677 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.71□□□□□ -0.37
RPS27P42677 AC105233.6-201ENST00000642093 218 ntBASIC12.71□□□□□ -0.37
RPS27P42677 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPS27P42677 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RPS27P42677 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RPS27P42677 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RPS27P42677 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms