Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 AC067931.2-201ENST00000623655 2003 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 AL359183.1-201ENST00000623796 2132 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.15□□□□□ -0.14
HMGCLP35914 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 AC114947.1-202ENST00000514136 344 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 RN7SL455P-201ENST00000580629 282 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 MIR4754-201ENST00000582477 89 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.15□□□□□ -0.14
HMGCLP35914 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 CR392039.2-201ENST00000623182 509 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 AC138627.1-207ENST00000641560 1006 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGCLP35914 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 KRT8P31-201ENST00000504812 1408 ntBASIC14.15□□□□□ -0.14
HMGCLP35914 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGCLP35914 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.15□□□□□ -0.15
HMGCLP35914 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 AC068760.1-201ENST00000493579 1953 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGCLP35914 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGCLP35914 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 AC008723.1-201ENST00000506922 207 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 AC005740.1-201ENST00000515639 522 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 ALG1L13P-202ENST00000519320 584 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 AC242376.1-201ENST00000559033 726 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 AC026803.1-201ENST00000569130 274 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 AC020922.3-201ENST00000595064 547 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGCLP35914 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.14□□□□□ -0.15
HMGCLP35914 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms