Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 DLX4-206ENST00000611342 1662 ntBASIC19.45■□□□□ 0.7
CPS1P31327 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC19.45■□□□□ 0.7
CPS1P31327 AC009517.1-201ENST00000454750 570 ntBASIC19.45■□□□□ 0.7
CPS1P31327 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC19.45■□□□□ 0.7
CPS1P31327 ALG10-202ENST00000538927 571 ntTSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 AC112694.1-202ENST00000540985 943 ntBASIC19.45■□□□□ 0.7
CPS1P31327 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC19.45■□□□□ 0.7
CPS1P31327 MIR4326-201ENST00000582203 59 ntBASIC19.45■□□□□ 0.7
CPS1P31327 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CPS1P31327 AC127002.1-201ENST00000619123 455 ntBASIC19.45■□□□□ 0.7
CPS1P31327 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.45■□□□□ 0.7
CPS1P31327 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CPS1P31327 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 MKL1-204ENST00000402630 747 ntTSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 SPTLC1P3-201ENST00000403408 259 ntBASIC19.44■□□□□ 0.7
CPS1P31327 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 TUBB8P9-201ENST00000422534 1276 ntBASIC19.44■□□□□ 0.7
CPS1P31327 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 TUBB8P10-201ENST00000430210 1279 ntBASIC19.44■□□□□ 0.7
CPS1P31327 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 AC103724.2-201ENST00000520355 476 ntBASIC19.44■□□□□ 0.7
CPS1P31327 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC19.44■□□□□ 0.7
CPS1P31327 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC19.44■□□□□ 0.7
CPS1P31327 DUX4L33-201ENST00000635217 958 ntBASIC19.44■□□□□ 0.7
CPS1P31327 AC245369.8-201ENST00000636589 306 ntBASIC19.44■□□□□ 0.7
CPS1P31327 CDIPT-AS1-203ENST00000638164 713 ntBASIC19.44■□□□□ 0.7
CPS1P31327 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 TUBA3GP-201ENST00000410028 1325 ntBASIC19.44■□□□□ 0.7
CPS1P31327 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPS1P31327 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.44■□□□□ 0.7
CPS1P31327 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 AP001267.2-201ENST00000532619 2086 ntBASIC19.43■□□□□ 0.7
CPS1P31327 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPS1P31327 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPS1P31327 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC19.43■□□□□ 0.7
CPS1P31327 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC19.43■□□□□ 0.7
CPS1P31327 RN7SL677P-201ENST00000466970 319 ntBASIC19.43■□□□□ 0.7
CPS1P31327 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 AC133555.4-201ENST00000569081 152 ntBASIC19.43■□□□□ 0.7
CPS1P31327 FAM223B-202ENST00000598177 713 ntBASIC19.43■□□□□ 0.7
CPS1P31327 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CPS1P31327 MIR6819-201ENST00000622122 61 ntBASIC19.43■□□□□ 0.7
CPS1P31327 FAM223A-202ENST00000625204 713 ntBASIC19.43■□□□□ 0.7
CPS1P31327 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC19.43■□□□□ 0.7
CPS1P31327 AL139424.3-202ENST00000641619 917 ntBASIC19.43■□□□□ 0.7
CPS1P31327 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPS1P31327 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPS1P31327 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CPS1P31327 ADK-205ENST00000539909 1866 ntTSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPS1P31327 AC113367.3-201ENST00000508316 1912 ntBASIC19.43■□□□□ 0.7
CPS1P31327 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CPS1P31327 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPS1P31327 NME1-209ENST00000511355 1645 ntTSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPS1P31327 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms