Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC27P30260 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDC27P30260 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC27P30260 BANF1P3-201ENST00000412556 261 ntBASIC16.47■□□□□ 0.23
CDC27P30260 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC27P30260 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC27P30260 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.47■□□□□ 0.23
CDC27P30260 RN7SL574P-201ENST00000581512 297 ntBASIC16.47■□□□□ 0.23
CDC27P30260 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.47■□□□□ 0.23
CDC27P30260 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC27P30260 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC27P30260 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDC27P30260 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC27P30260 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDC27P30260 AL139158.3-201ENST00000641212 1562 ntBASIC16.47■□□□□ 0.23
CDC27P30260 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDC27P30260 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.47■□□□□ 0.23
CDC27P30260 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 NCLP1-201ENST00000445357 1963 ntBASIC16.46■□□□□ 0.23
CDC27P30260 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 MIR769-201ENST00000390225 118 ntBASIC16.46■□□□□ 0.23
CDC27P30260 ELK2AP-201ENST00000392510 1007 ntBASIC16.46■□□□□ 0.23
CDC27P30260 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC27P30260 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC27P30260 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC27P30260 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC27P30260 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 AL161670.2-201ENST00000557650 1227 ntBASIC16.46■□□□□ 0.23
CDC27P30260 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC27P30260 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC27P30260 AP001505.2-201ENST00000616815 443 ntBASIC16.46■□□□□ 0.23
CDC27P30260 AL139099.5-201ENST00000635274 300 ntBASIC16.46■□□□□ 0.23
CDC27P30260 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 CICP17-201ENST00000418553 2377 ntBASIC16.46■□□□□ 0.23
CDC27P30260 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDC27P30260 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC27P30260 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC27P30260 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC27P30260 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CDC27P30260 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.46■□□□□ 0.22
CDC27P30260 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CDC27P30260 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDC27P30260 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC27P30260 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC27P30260 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDC27P30260 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.45■□□□□ 0.22
CDC27P30260 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
CDC27P30260 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC27P30260 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CDC27P30260 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDC27P30260 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC27P30260 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.45■□□□□ 0.22
CDC27P30260 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDC27P30260 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms