Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.54□□□□□ -0.08
PTPN3P26045 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PTPN3P26045 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTPN3P26045 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTPN3P26045 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PTPN3P26045 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 RCC2P1-201ENST00000452257 1476 ntBASIC14.53□□□□□ -0.08
PTPN3P26045 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 TSPY25P-201ENST00000429463 745 ntBASIC14.53□□□□□ -0.08
PTPN3P26045 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 AC108725.1-201ENST00000495472 409 ntBASIC14.53□□□□□ -0.08
PTPN3P26045 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PTPN3P26045 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.53□□□□□ -0.08
PTPN3P26045 NCLP1-201ENST00000445357 1963 ntBASIC14.53□□□□□ -0.08
PTPN3P26045 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTPN3P26045 AL365181.3-201ENST00000605886 3222 ntBASIC14.53□□□□□ -0.08
PTPN3P26045 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.52□□□□□ -0.08
PTPN3P26045 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PTPN3P26045 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN3P26045 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTPN3P26045 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PTPN3P26045 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PTPN3P26045 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.52□□□□□ -0.08
PTPN3P26045 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.52□□□□□ -0.09
PTPN3P26045 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 RN7SL277P-201ENST00000481521 288 ntBASIC14.52□□□□□ -0.09
PTPN3P26045 RCC2P8-201ENST00000502779 1035 ntBASIC14.52□□□□□ -0.09
PTPN3P26045 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.52□□□□□ -0.09
PTPN3P26045 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.52□□□□□ -0.09
PTPN3P26045 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
PTPN3P26045 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
PTPN3P26045 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PTPN3P26045 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PTPN3P26045 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTPN3P26045 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.52□□□□□ -0.09
PTPN3P26045 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN3P26045 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN3P26045 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 AC061965.1-201ENST00000560524 1465 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 AC073548.1-201ENST00000624088 1882 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms