Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VCLP18206 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.44□□□□□ -0.1
VCLP18206 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.44□□□□□ -0.1
VCLP18206 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 KRT8P13-201ENST00000463294 1010 ntBASIC14.44□□□□□ -0.1
VCLP18206 SERPINA13P-202ENST00000478994 924 ntBASIC14.44□□□□□ -0.1
VCLP18206 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.44□□□□□ -0.1
VCLP18206 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.44□□□□□ -0.1
VCLP18206 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.44□□□□□ -0.1
VCLP18206 AC005730.2-201ENST00000564549 1184 ntBASIC14.44□□□□□ -0.1
VCLP18206 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.44□□□□□ -0.1
VCLP18206 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 AC244452.3-201ENST00000636814 210 ntBASIC14.44□□□□□ -0.1
VCLP18206 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.44□□□□□ -0.1
VCLP18206 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCLP18206 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 AL008718.2-201ENST00000609206 1313 ntBASIC14.43□□□□□ -0.1
VCLP18206 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 AC215219.1-201ENST00000400706 1817 ntBASIC14.43□□□□□ -0.1
VCLP18206 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 AC244394.1-201ENST00000435000 1665 ntBASIC14.43□□□□□ -0.1
VCLP18206 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.43□□□□□ -0.1
VCLP18206 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.43□□□□□ -0.1
VCLP18206 AC091804.1-201ENST00000486888 567 ntBASIC14.43□□□□□ -0.1
VCLP18206 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.43□□□□□ -0.1
VCLP18206 AC020914.3-201ENST00000594712 304 ntBASIC14.43□□□□□ -0.1
VCLP18206 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
VCLP18206 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
VCLP18206 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VCLP18206 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.43□□□□□ -0.1
VCLP18206 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms