Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL4P13236 AP000354.1-201ENST00000396982 456 ntBASIC13.33□□□□□ -0.28
CCL4P13236 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 AC025186.1-201ENST00000478174 870 ntBASIC13.33□□□□□ -0.28
CCL4P13236 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.33□□□□□ -0.28
CCL4P13236 KRT18P37-201ENST00000520711 1282 ntBASIC13.33□□□□□ -0.28
CCL4P13236 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.33□□□□□ -0.28
CCL4P13236 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 AC006483.2-201ENST00000609813 515 ntBASIC13.33□□□□□ -0.28
CCL4P13236 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 MIR600HG-201ENST00000449175 5984 ntBASIC13.33□□□□□ -0.28
CCL4P13236 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL4P13236 AL590824.1-201ENST00000403828 1349 ntBASIC13.33□□□□□ -0.28
CCL4P13236 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL4P13236 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CCL4P13236 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 AC004554.1-201ENST00000422830 1468 ntBASIC13.32□□□□□ -0.28
CCL4P13236 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 COX20P1-201ENST00000366529 357 ntBASIC13.32□□□□□ -0.28
CCL4P13236 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL4P13236 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.32□□□□□ -0.28
CCL4P13236 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL4P13236 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 PEBP1P2-201ENST00000603980 558 ntBASIC13.32□□□□□ -0.28
CCL4P13236 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL4P13236 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL4P13236 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL4P13236 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms